STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002052Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
get4
Guided entry of tail-anchored proteins factor 4.
    
   0.734
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
   0.487
rad23a
RAD23 homolog A, nucleotide excision repair protein a.
    
   0.487
rad23a-2
RAD23 homolog A, nucleotide excision repair protein a.
    
   0.487
ENSACLP00000029079
Uncharacterized protein.
    
   0.487
frem1
Fras1 related extracellular matrix 1a.
   
 
 0.465
ENSACLP00000030575
Fras1 related extracellular matrix 1b.
   
 
 0.465
ENSACLP00000005037
Solute carrier family 8 member 1a; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 
 0.456
LOC113030023
Solute carrier family 8 member 2a; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 
 0.456
ENSACLP00000010090
G_PROTEIN_RECEP_F2_4 domain-containing protein.
   
 
 0.456
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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