Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000002055Structural maintenance of chromosomes flexible hinge domain containing 1. (1782 aa)    
Predicted Functional Partners:
mvb12a
Uncharacterized protein.
    
   0.905
lrif1
Uncharacterized protein.
    
 
 0.885
nudcd1
NudC domain containing 1.
    
   0.880
ENSACLP00000001939
Methyltransferase like 4; Belongs to the MT-A70-like family.
   
  
 0.863
nars2
Asparaginyl-tRNA synthetase 2, mitochondrial.
    
   0.796
wars1
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.775
ENSACLP00000026996
VWFA domain-containing protein.
    
 
 0.774
scaf11
RING-type domain-containing protein.
   
    0.755
ENSACLP00000016057
AT hook containing transcription factor 1.
   
  
 0.752
nup133
Nucleoporin 133.
   
  
 0.733
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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