Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSACLP00000002061RNA binding motif protein 19. (899 aa)    
Predicted Functional Partners:
bms1
BMS1 ribosome biogenesis factor.
   
 
 0.992
LOC113016769
PWP2 small subunit processome component.
   
 
 0.991
bysl
Bystin-like.
   
 
 0.984
wdr36
WD repeat domain 36.
   
 
 0.981
nop9
Uncharacterized protein.
   
   0.981
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.977
utp4
UTP4 small subunit processome component.
   
   0.973
mphosph10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 
 0.972
rbm28
RNA binding motif protein 28.
   
  0.967
LOC113007828
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.964
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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