Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113013643Natriuretic peptide A-like. (130 aa)    
Predicted Functional Partners:
ENSACLP00000035421
Wu:fj39g12.
     
 0.953
nppc
Natriuretic peptide C.
     
 0.946
npr3
PDZ domain-containing protein.
     
 0.922
LOC113017776
Uncharacterized protein.
  
  
  0.893
LOC113019459
Guanylate cyclase.
     
 0.884
LOC113026027
Guanylate cyclase.
     
 0.884
LOC113014284
Guanylate cyclase.
     
 0.859
ENSACLP00000022825
Guanylate cyclase.
     
 0.859
ENSACLP00000003812
Si:ch211-215j19.12; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
     
 0.827
ENSACLP00000037564
Guanylate cyclase.
     
 0.827
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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