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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021229DUF4596 domain-containing protein. (1709 aa)    
Predicted Functional Partners:
espl1
Extra spindle pole bodies like 1, separase.
   
 
 0.824
aspm
Abnormal spindle microtubule assembly.
   
  
 0.795
ENSACLP00000002644
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.761
ENSACLP00000028406
NDC80 kinetochore complex component.
   
  
 0.706
nusap1
Nucleolar and spindle associated protein 1.
   
  
 0.702
ttk
Ttk protein kinase.
   
  
 0.700
LOC113019390
Centrosomal protein 55 like.
   
  
 0.681
LOC113025499
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.673
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 
 0.609
LOC113009944
Fizzy/cell division cycle 20 related 1b.
   
 
 0.609
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.