Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phbProhibitin. (271 aa)    
Predicted Functional Partners:
LOC113009519
Prohibitin.
   
 0.998
PHB2
Prohibitin.
   
 0.998
stoml2
Stomatin (EPB72)-like 2.
   
 
 0.988
c1qbp
Complement component 1, q subcomponent binding protein.
   
 0.970
e2f1
E2F transcription factor 1.
    
 
 0.969
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 0.957
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.
   
 
 0.942
ENSACLP00000003469
Si:ch1073-174d20.2; Belongs to the AAA ATPase family.
  
 0.940
LOC113023517
AAA domain-containing protein.
  
 0.940
afg3l2
AFG3-like AAA ATPase 2.
  
 0.940
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.