STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002128TMEM219 domain-containing protein. (275 aa)    
Predicted Functional Partners:
LOC113028005
Mitogen-activated protein kinase kinase 6.
    
 0.649
MAP2K6
Mitogen-activated protein kinase kinase 6.
    
 0.649
ENSACLP00000006066
BUB3 mitotic checkpoint protein.
     
 0.499
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
   
 
  0.485
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
   
 
  0.473
yap1
Yes-associated protein 1.
    
 
 0.446
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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