Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000002128TMEM219 domain-containing protein. (275 aa)    
Predicted Functional Partners:
yap1
Yes-associated protein 1.
    
 
 0.786
LOC113028005
Mitogen-activated protein kinase kinase 6.
    
 0.722
MAP2K6
Mitogen-activated protein kinase kinase 6.
    
 0.722
LOC113007418
RAN binding protein 2.
   
 
  0.577
nudc
NudC nuclear distribution protein.
     
  0.573
mapre3
Microtubule-associated protein, RP/EB family, member 3a.
    
 0.530
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 0.530
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 0.530
LOC113037295
Microtubule-associated protein, RP/EB family, member 3b.
    
 0.530
rcc2
Regulator of chromosome condensation 2.
     
  0.521
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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