ENSACLP00000002145 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000002145

Ig-like domain-containing protein. (146 aa)

Predicted Functional Partners:

ENSACLP00000002879

0.852

LOC113022754

0.651

ENSACLP00000024801

0.627

rhbdl3

0.600

wdr18

0.550

ENSACLP00000011126

0.534

ripk4

0.532

ENSACLP00000014152

0.485

ENSACLP00000014174

0.485

ENSACLP00000014191

0.485

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000002145	ENSACLP00000002879	ENSACLP00000002145	ENSACLP00000002879	Ig-like domain-containing protein.	Uncharacterized protein.	0.852
ENSACLP00000002145	ENSACLP00000011126	ENSACLP00000002145	ENSACLP00000011126	Ig-like domain-containing protein.	Testis expressed 10.	0.534
ENSACLP00000002145	ENSACLP00000014152	ENSACLP00000002145	ENSACLP00000014152	Ig-like domain-containing protein.	Uncharacterized protein.	0.485
ENSACLP00000002145	ENSACLP00000014174	ENSACLP00000002145	ENSACLP00000014174	Ig-like domain-containing protein.	Uncharacterized protein.	0.485
ENSACLP00000002145	ENSACLP00000014191	ENSACLP00000002145	ENSACLP00000014191	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.485
ENSACLP00000002145	ENSACLP00000024801	ENSACLP00000002145	ENSACLP00000024801	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.627
ENSACLP00000002145	LOC113022754	ENSACLP00000002145	ENSACLP00000016423	Ig-like domain-containing protein.	Tankyrase_bdg_C domain-containing protein.	0.651
ENSACLP00000002145	rhbdl3	ENSACLP00000002145	ENSACLP00000009616	Ig-like domain-containing protein.	Rhomboid-related protein 3; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.	0.600
ENSACLP00000002145	ripk4	ENSACLP00000002145	ENSACLP00000039319	Ig-like domain-containing protein.	Receptor-interacting serine-threonine kinase 4.	0.532
ENSACLP00000002145	wdr18	ENSACLP00000002145	ENSACLP00000028978	Ig-like domain-containing protein.	WD repeat domain 18.	0.550
ENSACLP00000002879	ENSACLP00000002145	ENSACLP00000002879	ENSACLP00000002145	Uncharacterized protein.	Ig-like domain-containing protein.	0.852
ENSACLP00000011126	ENSACLP00000002145	ENSACLP00000011126	ENSACLP00000002145	Testis expressed 10.	Ig-like domain-containing protein.	0.534
ENSACLP00000011126	wdr18	ENSACLP00000011126	ENSACLP00000028978	Testis expressed 10.	WD repeat domain 18.	0.999
ENSACLP00000014152	ENSACLP00000002145	ENSACLP00000014152	ENSACLP00000002145	Uncharacterized protein.	Ig-like domain-containing protein.	0.485
ENSACLP00000014174	ENSACLP00000002145	ENSACLP00000014174	ENSACLP00000002145	Uncharacterized protein.	Ig-like domain-containing protein.	0.485
ENSACLP00000014191	ENSACLP00000002145	ENSACLP00000014191	ENSACLP00000002145	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.485
ENSACLP00000024801	ENSACLP00000002145	ENSACLP00000024801	ENSACLP00000002145	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.627
LOC113022754	ENSACLP00000002145	ENSACLP00000016423	ENSACLP00000002145	Tankyrase_bdg_C domain-containing protein.	Ig-like domain-containing protein.	0.651
LOC113022754	rhbdl3	ENSACLP00000016423	ENSACLP00000009616	Tankyrase_bdg_C domain-containing protein.	Rhomboid-related protein 3; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.	0.470
LOC113022754	ripk4	ENSACLP00000016423	ENSACLP00000039319	Tankyrase_bdg_C domain-containing protein.	Receptor-interacting serine-threonine kinase 4.	0.954