STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022577Anion exchange protein. (1092 aa)    
Predicted Functional Partners:
dnali1
Dynein, axonemal, light intermediate chain 1.
   
  
 0.562
LOC113025776
Ras homolog family member F.
    
  0.562
LOC113019750
Cytochrome b5 domain containing 1; Belongs to the cytochrome b5 family.
   
  
 0.542
LOC113025125
Family with sequence similarity 169 member B.
    
  0.536
uaca
Uveal autoantigen with coiled-coil domains and ankyrin repeats b.
    
  0.535
LOC113015979
Uncharacterized protein.
     
 0.511
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.499
LOC113022284
Macrophage stimulating 1 receptor a.
    
  0.499
mst1r
Macrophage stimulating 1 receptor b.
    
  0.499
mtr
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.494
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.