Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113036837G_PROTEIN_RECEP_F1_2 domain-containing protein. (344 aa)    
Predicted Functional Partners:
ENSACLP00000011000
Uncharacterized protein.
    
 0.987
ENSACLP00000016464
Tyrosine-protein kinase.
    
  0.801
syk
Tyrosine-protein kinase.
    
  0.801
LOC113031953
Complement 4B (Chido blood group).
    
 0.743
ENSACLP00000003027
Complement 4B (Chido blood group).
    
 0.743
ENSACLP00000016006
Complement component c3b, tandem duplicate 2.
    
 0.743
LOC113023847
Uncharacterized protein.
    
 0.743
ENSACLP00000033058
Uncharacterized protein.
    
 0.743
ENSACLP00000035192
Uncharacterized protein.
    
 0.743
ENSACLP00000035493
Uncharacterized protein.
    
 0.743
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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