STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adam19ADAM metallopeptidase domain 19b. (947 aa)    
Predicted Functional Partners:
ENSACLP00000008120
RAS p21 protein activator (GTPase activating protein) 1a.
    
  0.539
LOC113023559
SH3 and PX domains 2Aa.
    
 0.486
SH3PXD2A
SH3 and PX domains 2A.
    
 0.486
ENSACLP00000037698
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.470
sh3pxd2b
SH3 and PX domains 2B.
    
 0.467
ENSACLP00000036302
Leucine-rich repeats and guanylate kinase domain containing.
    
  0.455
LOC113022294
Eph receptor A2 a.
   
  0.452
LOC113013151
Eph receptor A2 b.
   
  0.452
lgi2
Leucine-rich repeat LGI family, member 2a.
     
 0.449
LOC113024239
Leucine-rich repeat LGI family, member 2b.
     
 0.449
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.