STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002199Zinc finger and BTB domain containing 33. (604 aa)    
Predicted Functional Partners:
ARVCF
ARVCF delta catenin family member b.
    
 
 0.917
LOC113023653
Catenin (cadherin-associated protein), delta 1.
    
 
 0.917
CTNND1
Catenin delta 1.
    
 
 0.917
PKP4
Plakophilin 4.
    
 
 0.847
LOC113028906
Catenin (cadherin-associated protein), delta 2a.
    
 
 0.847
LOC113010178
Catenin (cadherin-associated protein), delta 2b.
    
 
 0.847
ENSACLP00000010348
Nuclear receptor corepressor 1.
    
 0.833
ncor2
Nuclear receptor corepressor 2.
    
 0.833
LOC113018712
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
    
 0.832
ENSACLP00000021001
F-box and leucine-rich repeat protein 17.
    
 
 0.784
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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