Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ttll7Tubulin tyrosine ligase-like family, member 7. (949 aa)    
Predicted Functional Partners:
svbp
Small vasohibin binding protein.
      
 0.705
LOC113024111
Centriole, cilia and spindle-associated protein b.
      
 0.654
LOC113014242
Dystrobrevin binding protein 1b.
      
 0.601
kif3a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.584
ENSACLP00000036202
Uncharacterized protein.
      
 0.543
ENSACLP00000036209
Tubulin tyrosine ligase-like family, member 5.
      
 0.543
ENSACLP00000023037
CDC42 effector protein (Rho GTPase binding) 1b.
      
 0.523
ENSACLP00000014013
EF-hand calcium binding domain 2.
      
 0.513
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
      
 0.511
znf142
Zinc finger protein 142.
      
 0.504
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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