Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113025100Troponin I type 2a (skeletal, fast), tandem duplicate 1. (178 aa)    
Predicted Functional Partners:
tnnc1
Troponin C type 1b (slow).
   
 0.968
LOC113013990
Troponin C type 2 (fast).
   
 0.960
LOC113013989
Si:rp71-17i16.4.
   
 0.960
ENSACLP00000002816
Uncharacterized protein.
  
 0.927
ENSACLP00000014003
Uncharacterized protein.
  
 0.927
ENSACLP00000002624
Troponin T type 3a (skeletal, fast).
  
 0.926
ENSACLP00000012012
Troponin T type 2a (cardiac).
  
 0.926
TNNT1
Troponin T1, slow skeletal type.
  
 0.925
ENSACLP00000012609
Troponin T type 1 (skeletal, slow).
  
 0.925
ENSACLP00000034083
Troponin T type 2b (cardiac).
  
 0.924
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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