Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
kiaa1211lDUF4592 domain-containing protein. (1012 aa)    
Predicted Functional Partners:
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.544
ENSACLP00000037094
Im:7152348.
   
 0.520
ENSACLP00000040532
C2H2-type domain-containing protein.
  
 
  0.512
frem1
Fras1 related extracellular matrix 1a.
    
 0.493
ENSACLP00000030575
Fras1 related extracellular matrix 1b.
    
 0.493
ENSACLP00000001877
Fraser extracellular matrix complex subunit 1.
   
 0.491
LOC113030556
Uncharacterized protein.
  
     0.479
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.478
LOC113022284
Macrophage stimulating 1 receptor a.
    
  0.478
mst1r
Macrophage stimulating 1 receptor b.
    
  0.478
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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