Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113016174Calcium binding protein 39-like. (337 aa)    
Predicted Functional Partners:
ENSACLP00000003215
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 0.984
strada
STE20 related adaptor alpha.
    
 0.962
STRADB
STE20 related adaptor beta.
    
 0.962
prkaa2
Non-specific serine/threonine protein kinase.
    
 0.915
prkaa1
Non-specific serine/threonine protein kinase.
    
 0.915
cab39
Calcium binding protein 39.
     
  0.872
LOC113033507
Calcium binding protein 39, like 1.
     
  0.871
LOC113033507-2
Calcium-binding protein 39-like.
     
  0.871
LOC113034208
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.
     
 0.759
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
     
 0.759
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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