STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIPA1L1Uncharacterized protein. (1743 aa)    
Predicted Functional Partners:
LOC113008802
Uncharacterized protein.
    
 0.689
LOC113021951
Uncharacterized protein.
    
 0.689
RAP2A
RAP2A, member of RAS oncogene family.
    
 0.654
LOC113007449
RAP2C, member of RAS oncogene family.
    
 0.654
LOC113006695
DIRAS family GTPase 1.
    
 0.641
LOC113012107
DIRAS family, GTP-binding RAS-like 1b.
    
 0.641
ENSACLP00000001671
Afadin, adherens junction formation factor a.
    
 0.613
ENSACLP00000003584
Uncharacterized protein.
    
 0.613
LOC113016417
RAP2A, member of RAS oncogene family b.
    
 0.602
mras
Muscle RAS oncogene homolog.
    
 0.596
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.