Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KHSRPKH-type splicing regulatory protein. (688 aa)    
Predicted Functional Partners:
ENSACLP00000006680
Poly-U binding splicing factor b.
   
 
 0.871
ENSACLP00000024094
RRM domain-containing protein.
   
 
 0.871
LOC113033271
Uncharacterized protein.
   
   0.803
ENSACLP00000017324
Far upstream element (FUSE) binding protein 3.
   
   0.803
ENSACLP00000010695
Survival of motor neuron 1, telomeric.
    
 
 0.787
exosc2
Exosome component 2.
   
  0.774
ENSACLP00000030503
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.771
aimp2
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
    
 
 0.760
drosha
Drosha ribonuclease III.
    
 
 0.683
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
    
 0.672
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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