Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113033125Si:dkey-91m11.5. (1283 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.980
abl1
Tyrosine-protein kinase.
    
 0.970
abl2
Tyrosine-protein kinase.
    
 0.953
LOC113036661
CRK proto-oncogene, adaptor protein.
    
 0.909
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.909
LOC113030677
Uncharacterized protein.
    
 0.909
LOC113016116
SHC (Src homology 2 domain containing) transforming protein 2.
     
 0.854
cblb
Cbl proto-oncogene B, E3 ubiquitin protein ligase.
    
 0.820
ENSACLP00000008280
Cbl-PTB domain-containing protein.
    
 0.820
ENSACLP00000009897
Cbl-PTB domain-containing protein.
    
 0.820
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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