Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
efcab7EF-hand calcium binding domain 7. (608 aa)    
Predicted Functional Partners:
iqce
Uncharacterized protein.
   
 0.992
ENSACLP00000002550
Si:dkeyp-81f3.4.
    
   0.970
EVC2
EvC ciliary complex subunit 2.
     
 0.959
evc
EvC ciliary complex subunit 1.
    
 0.956
LOC113024496
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
     
  0.815
ttyh3
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
     
  0.815
ttyh1
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
     
  0.815
LOC113020648
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
     
  0.815
ttyh2
Protein tweety homolog; Probable chloride channel; Belongs to the tweety family.
     
  0.815
efhb
EF-hand domain family, member B.
   
 
 0.792
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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