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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdadc1Cytidine and dCMP deaminase domain containing 1. (516 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
  
 
 0.930
tk1
Thymidine kinase.
  
 
 0.929
LOC113027086
Zgc:153031.
  
 
 0.888
dhfr
Dihydrofolate reductase.
  
 
 0.888
cmpk2
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
    
 0.883
dtymk
Deoxythymidylate kinase (thymidylate kinase).
    
 0.883
ephx2
Epoxide hydrolase 2, cytoplasmic.
  
 
  0.880
ak9
Adenylate kinase 9.
  
 0.863
ntpcr
Nucleoside-triphosphatase, cancer-related.
     
 0.840
ENSACLP00000008264
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
     
 0.837
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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