STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113011389Par-3 family cell polarity regulator alpha, b. (1410 aa)    
Predicted Functional Partners:
LOC113026241
Par-6 family cell polarity regulator alpha.
    
 0.976
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.973
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.973
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.957
LOC113014518
Par-6 family cell polarity regulator gamma b.
    
 0.957
LOC113022989
Cell division cycle 42.
    
 0.919
LOC113030260
Junctional adhesion molecule 3b.
    
 0.907
jam3
Junctional adhesion molecule 3a.
    
 0.907
nectin1
Nectin cell adhesion molecule 1b.
    
 0.906
LOC113030602
F11 receptor, tandem duplicate 1.
    
 0.893
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.