Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC113011389Par-3 family cell polarity regulator alpha, b. (1410 aa)    
Predicted Functional Partners:
LOC113026241
Par-6 family cell polarity regulator alpha.
   
 0.995
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.983
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.983
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
   
 0.981
LOC113014518
Par-6 family cell polarity regulator gamma b.
   
 0.979
LOC113030260
Junctional adhesion molecule 3b.
    
 0.966
jam3
Junctional adhesion molecule 3a.
    
 0.966
ENSACLP00000041338
Junctional adhesion molecule 2a.
    
  0.964
LOC113022989
Cell division cycle 42.
    
 0.939
LOC113030261
T cell lymphoma invasion and metastasis 1a.
    
 0.938
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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