Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113025101Troponin I type 2a (skeletal, fast), tandem duplicate 2. (174 aa)    
Predicted Functional Partners:
ENSACLP00000013800
Uncharacterized protein.
  
  
 
0.933
ENSACLP00000002624
Troponin T type 3a (skeletal, fast).
   
 0.861
ENSACLP00000014003
Uncharacterized protein.
   
 0.861
LOC113025104
Uncharacterized protein.
  
  
 
0.850
LOC113025103
Uncharacterized protein.
  
  
 
0.850
LOC113025100
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
  
  
 
0.847
LOC113025105
Troponin I2, fast skeletal type.
  
  
 
0.847
LOC113025102
Troponin I2, fast skeletal type.
  
  
 
0.847
ENSACLP00000012012
Troponin T type 2a (cardiac).
   
 0.844
ENSACLP00000034083
Troponin T type 2b (cardiac).
   
 0.844
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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