Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113022601Nuclear factor of activated T cells 5b. (1276 aa)    
Predicted Functional Partners:
rplp1
Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
      
 0.644
ENSACLP00000004087
Uncharacterized protein.
   
 
 0.597
ENSACLP00000004131
TAN domain-containing protein.
   
 
 0.597
tert
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
      
 0.555
nob1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
      
 0.544
vegfc
Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.527
LOC113028546
Distal-less homeobox 3b.
      
 0.526
babam2
BRISC and BRCA1 A complex member 2.
      
 0.519
tmem101
Transmembrane protein 101.
      
 0.514
ENSACLP00000036671
Mesenchyme homeobox 1.
      
 0.509
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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