Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ildr2Immunoglobulin-like domain containing receptor 2. (587 aa)    
Predicted Functional Partners:
cog1
Component of oligomeric golgi complex 1.
      
 0.502
cog2
Component of oligomeric golgi complex 2.
      
 0.502
tubd1
Tubulin, delta 1; Belongs to the tubulin family.
      
 0.491
pigo
Phosphatidylinositol glycan anchor biosynthesis, class O.
      
 0.490
LOC113025373
Occludin a.
   
  
 0.470
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
  
 
  0.468
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
  
 
  0.459
LOC113035014
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
  
 
  0.453
pla2g4a
Phospholipase A2.
     
  0.444
LOC113023765
Junction plakoglobin a.
   
 
 0.444
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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