close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113034837Rab-GAP TBC domain-containing protein. (842 aa)    
Predicted Functional Partners:
trappc8
Trafficking protein particle complex 8.
    
 
 0.679
ENSACLP00000022786
Unc-51 like autophagy activating kinase 1a.
    
  0.660
LOC113025845
Unc-51 like autophagy activating kinase 1.
    
  0.660
ulk2
Unc-51 like autophagy activating kinase 2.
    
  0.660
LOC113034294
RAB11a, member RAS oncogene family.
    
 0.633
LOC113016185
RAB11B, member RAS oncogene family, a.
    
 0.633
LOC113016583
Uncharacterized protein.
    
 0.633
LOC113011118
Uncharacterized protein.
    
 0.633
rab25
RAB25, member RAS oncogene family b.
    
 0.633
LOC113031621
RAB11a, member RAS oncogene family, like.
    
 0.633
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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