STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113019191Leukotriene B4 receptor 2a. (365 aa)    
Predicted Functional Partners:
LOC113025585
Guanine nucleotide binding protein (G protein), alpha 14.
    
  0.885
LOC113016248
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
  0.885
LOC113033130
Uncharacterized protein.
    
  0.885
LOC113025584
Uncharacterized protein.
    
  0.884
GNA14
G protein subunit alpha 14.
    
  0.882
ENSACLP00000029412
Guanine nucleotide binding protein (G protein), alpha 14a.
    
  0.882
LOC113015699
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
  0.879
LOC113011723
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
  0.879
LOC113019188
Leukotriene B4 receptor; Belongs to the G-protein coupled receptor 1 family.
     
  0.846
LOC113024684
Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.
     
  0.793
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.