upf3b protein (Astatotilapia calliptera) - STRING interaction network

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[Homology]

Score

upf3b

UPF3B regulator of nonsense mediated mRNA decay. (459 aa)

Predicted Functional Partners:

UPF2

0.998

smg5

0.992

ENSACLP00000010541

0.991

UPF1

0.991

smg6

0.981

eif4a3

0.980

rbm8a

0.980

casc3

0.977

LOC113016519

0.973

LOC113021021

0.970

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000010541	LOC113016519	ENSACLP00000010541	ENSACLP00000040032	Uncharacterized protein.	Mago homolog, exon junction complex subunit.	0.961
ENSACLP00000010541	LOC113021021	ENSACLP00000010541	ENSACLP00000012352	Uncharacterized protein.	Aly/REF export factor.	0.944
ENSACLP00000010541	UPF1	ENSACLP00000010541	ENSACLP00000033452	Uncharacterized protein.	UPF1 RNA helicase and ATPase.	0.872
ENSACLP00000010541	UPF2	ENSACLP00000010541	ENSACLP00000018593	Uncharacterized protein.	UPF2 regulator of nonsense mediated mRNA decay.	0.996
ENSACLP00000010541	casc3	ENSACLP00000010541	ENSACLP00000023796	Uncharacterized protein.	Casc3 exon junction complex subunit.	0.984
ENSACLP00000010541	eif4a3	ENSACLP00000010541	ENSACLP00000006227	Uncharacterized protein.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.984
ENSACLP00000010541	rbm8a	ENSACLP00000010541	ENSACLP00000014099	Uncharacterized protein.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.981
ENSACLP00000010541	smg5	ENSACLP00000010541	ENSACLP00000013689	Uncharacterized protein.	SMG5 nonsense mediated mRNA decay factor.	0.989
ENSACLP00000010541	smg6	ENSACLP00000010541	ENSACLP00000007816	Uncharacterized protein.	SMG6 nonsense mediated mRNA decay factor.	0.990
ENSACLP00000010541	upf3b	ENSACLP00000010541	ENSACLP00000002374	Uncharacterized protein.	UPF3B regulator of nonsense mediated mRNA decay.	0.991
LOC113016519	ENSACLP00000010541	ENSACLP00000040032	ENSACLP00000010541	Mago homolog, exon junction complex subunit.	Uncharacterized protein.	0.961
LOC113016519	LOC113021021	ENSACLP00000040032	ENSACLP00000012352	Mago homolog, exon junction complex subunit.	Aly/REF export factor.	0.987
LOC113016519	UPF1	ENSACLP00000040032	ENSACLP00000033452	Mago homolog, exon junction complex subunit.	UPF1 RNA helicase and ATPase.	0.961
LOC113016519	UPF2	ENSACLP00000040032	ENSACLP00000018593	Mago homolog, exon junction complex subunit.	UPF2 regulator of nonsense mediated mRNA decay.	0.991
LOC113016519	casc3	ENSACLP00000040032	ENSACLP00000023796	Mago homolog, exon junction complex subunit.	Casc3 exon junction complex subunit.	0.995
LOC113016519	eif4a3	ENSACLP00000040032	ENSACLP00000006227	Mago homolog, exon junction complex subunit.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.996
LOC113016519	rbm8a	ENSACLP00000040032	ENSACLP00000014099	Mago homolog, exon junction complex subunit.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999
LOC113016519	smg5	ENSACLP00000040032	ENSACLP00000013689	Mago homolog, exon junction complex subunit.	SMG5 nonsense mediated mRNA decay factor.	0.878
LOC113016519	smg6	ENSACLP00000040032	ENSACLP00000007816	Mago homolog, exon junction complex subunit.	SMG6 nonsense mediated mRNA decay factor.	0.923
LOC113016519	upf3b	ENSACLP00000040032	ENSACLP00000002374	Mago homolog, exon junction complex subunit.	UPF3B regulator of nonsense mediated mRNA decay.	0.973