STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113025102Troponin I2, fast skeletal type. (172 aa)    
Predicted Functional Partners:
LOC113013990
Troponin C type 2 (fast).
   
 0.963
LOC113013989
Si:rp71-17i16.4.
   
 0.963
tnnc1
Troponin C type 1b (slow).
   
 0.923
LOC113008191
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.917
TNNT1
Troponin T1, slow skeletal type.
  
 0.902
ENSACLP00000014003
Uncharacterized protein.
  
 0.902
ENSACLP00000012609
Troponin T type 1 (skeletal, slow).
  
 0.901
ENSACLP00000002624
Troponin T type 3a (skeletal, fast).
   
 0.881
ENSACLP00000002816
Uncharacterized protein.
   
 0.881
ENSACLP00000004453
Uncharacterized protein.
   
 0.881
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.