Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ilf3Interleukin enhancer binding factor 3b. (848 aa)    
Predicted Functional Partners:
ENSACLP00000025221
Interleukin enhancer binding factor 2.
   
 0.999
strbp
Spermatid perinuclear RNA binding protein.
   
   0.995
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.992
XPO5
Exportin 5.
    
 
 0.963
sf3b4
Splicing factor 3b, subunit 4.
   
 
 0.961
LOC113025582
Heterogeneous nuclear ribonucleoprotein K, like.
   
 
 0.957
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.957
ENSACLP00000034958
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.946
ENSACLP00000034968
Protein kinase domain-containing protein.
    
 0.946
ENSACLP00000035104
Uncharacterized protein.
    
 0.946
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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