Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113014974Myelin basic protein a. (194 aa)    
Predicted Functional Partners:
LOC113030477
Proteolipid protein 1b.
   
  
 0.690
mbp
Myelin basic protein b.
      
 0.657
olig2
Oligodendrocyte lineage transcription factor 2.
      
 0.609
sox10
SRY-box transcription factor 10.
      
 0.600
ENSACLP00000003476
Myelin associated glycoprotein.
      
 0.518
LOC113036033
Growth associated protein 43.
      
 0.516
LOC113020337
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
      
 0.509
syn2
Synapsin IIb.
      
 0.502
LOC113020631
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.463
LOC113021239
ZP domain-containing protein.
  
     0.452
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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