Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113030708WSC domain containing 1b. (570 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
   
 0.988
pop4
POP4 homolog, ribonuclease P/MRP subunit.
   
 0.859
pop1
POP1 homolog, ribonuclease P/MRP subunit.
    
 0.855
rpp30
Uncharacterized protein.
    
 0.855
faap24
FA core complex associated protein 24.
    
 0.855
ENSACLP00000031190
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.853
rpp21
Ribonuclease P 21 subunit.
    
 0.849
ENSACLP00000020445
FA complementation group L.
    
 0.846
fancg
FA complementation group G.
    
 0.844
ENSACLP00000008753
Uncharacterized protein.
    
 0.844
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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