Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113006511Uncharacterized protein. (361 aa)    
Predicted Functional Partners:
LOC113006395
Deoxyribonuclease II beta.
     
  0.872
dnase2
Deoxyribonuclease II, lysosomal.
     
  0.872
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
   
 
  0.624
txndc5
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
     
  0.579
LOC113034002
Vesicle-associated membrane protein 8 (endobrevin).
     
 0.576
m6pr
Mannose-6-phosphate receptor (cation dependent).
     
  0.573
clta
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
     
  0.542
cltb
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
     
  0.542
CTSZ
Cathepsin Z; Belongs to the peptidase C1 family.
   
 
 0.541
ENSACLP00000006235
Cathepsin Z; Belongs to the peptidase C1 family.
   
 
 0.541
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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