ENSACLP00000002456 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000002456

Receptor tyrosine kinase-like orphan receptor 1. (692 aa)

Predicted Functional Partners:

fzd6

0.921

fzd4

0.919

ENSACLP00000005129

0.912

ENSACLP00000010316

0.906

fzd10

0.906

ENSACLP00000031693

0.905

ENSACLP00000002335

0.892

fzd3

0.891

FZD3

0.891

LOC113011338

0.880

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000002335	ENSACLP00000002456	ENSACLP00000002335	ENSACLP00000002456	Ig-like domain-containing protein.	Receptor tyrosine kinase-like orphan receptor 1.	0.892
ENSACLP00000002335	ENSACLP00000005129	ENSACLP00000002335	ENSACLP00000005129	Ig-like domain-containing protein.	Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.	0.767
ENSACLP00000002335	ENSACLP00000010316	ENSACLP00000002335	ENSACLP00000010316	Ig-like domain-containing protein.	Frizzled class receptor 9b; Belongs to the G-protein coupled receptor Fz/Smo family.	0.858
ENSACLP00000002335	ENSACLP00000031693	ENSACLP00000002335	ENSACLP00000031693	Ig-like domain-containing protein.	Frizzled class receptor 5; Belongs to the G-protein coupled receptor Fz/Smo family.	0.827
ENSACLP00000002335	FZD3	ENSACLP00000002335	ENSACLP00000016243	Ig-like domain-containing protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.839
ENSACLP00000002335	LOC113011338	ENSACLP00000002335	ENSACLP00000001611	Ig-like domain-containing protein.	Frizzled class receptor 8; Belongs to the G-protein coupled receptor Fz/Smo family.	0.827
ENSACLP00000002335	fzd10	ENSACLP00000002335	ENSACLP00000021366	Ig-like domain-containing protein.	Frizzled class receptor 10; Belongs to the G-protein coupled receptor Fz/Smo family.	0.858
ENSACLP00000002335	fzd3	ENSACLP00000002335	ENSACLP00000011834	Ig-like domain-containing protein.	Frizzled class receptor 3a; Belongs to the G-protein coupled receptor Fz/Smo family.	0.839
ENSACLP00000002335	fzd4	ENSACLP00000002335	ENSACLP00000034679	Ig-like domain-containing protein.	Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.910
ENSACLP00000002335	fzd6	ENSACLP00000002335	ENSACLP00000037158	Ig-like domain-containing protein.	Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.	0.839
ENSACLP00000002456	ENSACLP00000002335	ENSACLP00000002456	ENSACLP00000002335	Receptor tyrosine kinase-like orphan receptor 1.	Ig-like domain-containing protein.	0.892
ENSACLP00000002456	ENSACLP00000005129	ENSACLP00000002456	ENSACLP00000005129	Receptor tyrosine kinase-like orphan receptor 1.	Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.	0.912
ENSACLP00000002456	ENSACLP00000010316	ENSACLP00000002456	ENSACLP00000010316	Receptor tyrosine kinase-like orphan receptor 1.	Frizzled class receptor 9b; Belongs to the G-protein coupled receptor Fz/Smo family.	0.906
ENSACLP00000002456	ENSACLP00000031693	ENSACLP00000002456	ENSACLP00000031693	Receptor tyrosine kinase-like orphan receptor 1.	Frizzled class receptor 5; Belongs to the G-protein coupled receptor Fz/Smo family.	0.905
ENSACLP00000002456	FZD3	ENSACLP00000002456	ENSACLP00000016243	Receptor tyrosine kinase-like orphan receptor 1.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.891
ENSACLP00000002456	LOC113011338	ENSACLP00000002456	ENSACLP00000001611	Receptor tyrosine kinase-like orphan receptor 1.	Frizzled class receptor 8; Belongs to the G-protein coupled receptor Fz/Smo family.	0.880
ENSACLP00000002456	fzd10	ENSACLP00000002456	ENSACLP00000021366	Receptor tyrosine kinase-like orphan receptor 1.	Frizzled class receptor 10; Belongs to the G-protein coupled receptor Fz/Smo family.	0.906
ENSACLP00000002456	fzd3	ENSACLP00000002456	ENSACLP00000011834	Receptor tyrosine kinase-like orphan receptor 1.	Frizzled class receptor 3a; Belongs to the G-protein coupled receptor Fz/Smo family.	0.891
ENSACLP00000002456	fzd4	ENSACLP00000002456	ENSACLP00000034679	Receptor tyrosine kinase-like orphan receptor 1.	Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.919
ENSACLP00000002456	fzd6	ENSACLP00000002456	ENSACLP00000037158	Receptor tyrosine kinase-like orphan receptor 1.	Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.	0.921