Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSACLP00000002460Tubulin polymerization-promoting protein family member 2. (243 aa)    
Predicted Functional Partners:
LOC113028240
Gamma-synuclein; Belongs to the synuclein family.
   
 
 0.506
sncg
Gamma-synuclein; Belongs to the synuclein family.
   
 
 0.506
LOC113025649
Uncharacterized protein; Belongs to the synuclein family.
   
 
 0.491
LSM10
LSM10, U7 small nuclear RNA associated.
      
 0.462
cd3g
Uncharacterized protein.
    
 
 0.437
dse
Dermatan sulfate epimerase.
      
 0.426
lsm12
LSM12 homolog b.
   
  
 0.417
SERTM1
Serine rich and transmembrane domain containing 1.
      
 0.413
ENSACLP00000028390
Von Willebrand factor C domain containing 2.
      
 0.413
habp2
Uncharacterized protein.
      
 0.413
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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