STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002468Basic helix-loop-helix family, member a9. (277 aa)    
Predicted Functional Partners:
ASCL4
Achaete-scute family bHLH transcription factor 4.
      
 0.729
ENSACLP00000031832
Trafficking regulator of GLUT4 (SLC2A4) 1a.
      
 0.727
bhlhe23
Basic helix-loop-helix family, member e23.
      
 0.719
rd3l
Uncharacterized protein.
      
 0.716
TIMM22
Translocase of inner mitochondrial membrane 22.
      
 0.655
LOC113021824
BHLH domain-containing protein.
      
 0.613
ENSACLP00000032886
Fer3-like bHLH transcription factor.
      
 0.600
LOC113036202
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
      
 0.530
LOC113030401
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2; Belongs to the 14-3-3 family.
      
 0.530
ABR
ABR activator of RhoGEF and GTPase.
      
 0.525
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.