STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prdm8PR domain containing 8b. (692 aa)    
Predicted Functional Partners:
xkrx
XK-related protein.
   
  0.551
nox1
NADPH oxidase 1.
   
  0.551
xk
XK-related protein.
   
  0.551
LOC113016074
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
   
  0.551
ENSACLP00000013693
Dual oxidase.
   
  0.551
ENSACLP00000032377
NADPH oxidase, EF-hand calcium binding domain 5.
   
  0.551
nox4
FAD-binding FR-type domain-containing protein.
   
  0.551
setbp1
SET binding protein 1.
    
 0.550
lrrc71
Ash1 (absent, small, or homeotic)-like (Drosophila).
    
 0.550
ENSACLP00000029187
Uncharacterized protein.
    
 0.550
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.