Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc22a15Solute carrier family 22 member 15. (503 aa)    
Predicted Functional Partners:
LOC113030206
Malate synthase-like.
     
 0.846
SLC35F5
Solute carrier family 35 member F5.
    
 
 0.703
pla2g4a
Phospholipase A2.
    
 0.691
ENSACLP00000001504
Solute carrier family 22 member 18.
   
 0.675
slc25a34
Solute carrier family 25 member 34; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.661
LOC113025444
C2H2-type domain-containing protein.
      
 0.655
fam149b1
Family with sequence similarity 149 member B1.
     
 0.630
slc25a35
Solute carrier family 25 member 35; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.628
gnl1
Guanine nucleotide binding protein-like 1.
      
 0.600
ENSACLP00000027731
Integrator complex subunit 11.
   
 0.592
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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