STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc22a15Solute carrier family 22 member 15. (503 aa)    
Predicted Functional Partners:
LOC113030206
Malate synthase-like.
   
 
 0.868
pla2g4a
Phospholipase A2.
    
 0.761
ENSACLP00000027731
Integrator complex subunit 11.
   
 0.604
ENSACLP00000007510
Integrator complex subunit 1.
    
 0.593
ints4
Integrator complex subunit 4.
    
 0.588
ints3
Integrator complex subunit 3.
    
 0.584
ints13
Integrator complex subunit 13.
    
 0.583
fam149b1
Family with sequence similarity 149 member B1.
     
 0.579
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.575
ENSACLP00000014097
Integrator complex subunit 10.
    
 0.572
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.