STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113036806Peptidoglycan recognition protein 5. (167 aa)    
Predicted Functional Partners:
LOC113023986
Uncharacterized protein.
  
 
0.891
LOC113021887
Phosphatidylinositol glycan anchor biosynthesis, class U.
     
 0.700
PIGU
Phosphatidylinositol glycan anchor biosynthesis class U.
     
 0.700
ENSACLP00000007985
Si:ch73-263o4.3.
   
 0.609
SDS
Serine dehydratase.
   
 0.609
LOC113035303
PALP domain-containing protein.
   
 0.609
LOC113012553
Serine dehydratase-like.
   
 0.609
ppt2
Palmitoyl-protein thioesterase 2.
    
 0.602
ENSACLP00000016223
Zgc:66024.
    
 0.598
ppt1
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
    
  0.580
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.