STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113036815Fork-head domain-containing protein. (398 aa)    
Predicted Functional Partners:
ENSACLP00000003117
Fork-head domain-containing protein.
  
  
 
0.835
ENSACLP00000026356
Forkhead box G1a.
  
  
 
0.832
suox
Sulfite oxidase.
     
 0.796
LOC113013070
MBD domain-containing protein.
    
 0.686
sirt1
Deacetylase sirtuin-type domain-containing protein.
    
 0.660
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.640
LOC113025730
Mothers against decapentaplegic homolog.
    
 0.608
ENSACLP00000022602
Mothers against decapentaplegic homolog.
    
 0.608
LOC113014376
Mothers against decapentaplegic homolog.
    
 0.608
LOC113033624
Mothers against decapentaplegic homolog.
    
 0.608
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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