STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113019192Uncharacterized protein. (1020 aa)    
Predicted Functional Partners:
stk39
Serine threonine kinase 39.
    
 0.844
LOC113010698
Oxidative stress responsive kinase 1a.
    
 0.844
LOC113029050
Oxidative stress responsive kinase 1b.
    
 0.844
strada
STE20 related adaptor alpha.
    
 0.621
STRADB
STE20 related adaptor beta.
    
 0.621
tk2
Thymidine kinase 2.
    
  0.613
ENSACLP00000033251
2-epi-5-epi-valiolone synthase.
   
 0.593
CMPK1
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
  
 
  0.584
dtymk
Deoxythymidylate kinase (thymidylate kinase).
    
  0.582
tk1
Thymidine kinase.
   
 
  0.581
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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