Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pou2f1POU domain protein. (717 aa)    
Predicted Functional Partners:
pou2f3
POU domain protein.
     
  0.872
LOC113014734
POU domain protein.
     
  0.871
ENSACLP00000038517
POU domain protein.
     
  0.871
sp1
Sp1 transcription factor.
    
 0.859
pou2af1
Uncharacterized protein.
    
 
 0.814
snapc4
Uncharacterized protein.
    
  0.808
c14h11orf53
Si:ch211-213d14.1.
    
 
 0.804
snapc3
Small nuclear RNA activating complex, polypeptide 3.
    
  0.800
snapc5
Small nuclear RNA activating complex, polypeptide 5.
    
  0.789
snapc2
Uncharacterized protein.
    
  0.783
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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