Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002550Si:dkeyp-81f3.4. (173 aa)    
Predicted Functional Partners:
efcab7
EF-hand calcium binding domain 7.
    
   0.970
ENSACLP00000017542
Uncharacterized protein.
   
   0.965
iqub
IQ motif and ubiquitin domain containing.
    
 
 0.911
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.903
cfap52
Cilia and flagella associated protein 52.
   
   0.903
LOC113011333
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.903
LOC113020616
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
    
 0.903
ENSACLP00000029129
MORN repeat containing 5.
   
   0.893
prkar1a
Protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b.
    
  0.890
prkar2a
Protein kinase, cAMP-dependent, regulatory, type II, alpha A.
    
  0.890
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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