Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LYPD1LY6/PLAUR domain containing 1. (139 aa)    
Predicted Functional Partners:
ecel1
Endothelin converting enzyme-like 1.
    
 
 0.657
LOC113037362
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
    
   0.626
ENSACLP00000020260
Cholinergic receptor, nicotinic, alpha 4b.
    
   0.626
ENSACLP00000023314
Uncharacterized protein.
    
   0.626
ndnf
Neuron-derived neurotrophic factor.
      
 0.601
casz1
Castor zinc finger 1.
      
 0.574
LOC113014436
Neurexophilin; May be signaling molecules that resemble neuropeptides.
      
 0.553
nxph2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
      
 0.553
LOC113020349
Neurexophilin; May be signaling molecules that resemble neuropeptides.
      
 0.553
LYPD6
LY6/PLAUR domain containing 6.
   
 
 0.501
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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