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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCDHGlutaryl-CoA dehydrogenase b. (451 aa)    
Predicted Functional Partners:
ENSACLP00000024264
Enoyl-CoA delta isomerase 2.
  
 0.967
etfb
Electron transfer flavoprotein subunit beta.
  
 0.948
etfa
Electron transfer flavoprotein subunit alpha.
  
 0.947
ENSACLP00000009358
Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.940
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.935
LOC113016539
Sterol carrier protein 2b.
  
 0.935
ehhadh
Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.929
LOC113012532
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.923
ENSACLP00000040367
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a.
  
 0.923
LOC113030206
Malate synthase-like.
  
 
 0.898
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.