Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002580RING-type domain-containing protein. (101 aa)    
Predicted Functional Partners:
ENSACLP00000010589
Tumor protein p53 binding protein, 1.
    
 0.633
RPS27A
Ribosomal protein S27a.
    
  0.595
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.594
fut8
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
     
 0.582
LOC113008023
BRCA1 associated RING domain 1.
    
 0.566
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
     
 0.480
ENSACLP00000039321
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.480
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
 0.479
ENSACLP00000009063
PAX interacting (with transcription-activation domain) protein 1.
    
 0.477
mdc1
Uncharacterized protein.
    
 0.477
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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