Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002624Troponin T type 3a (skeletal, fast). (225 aa)    
Predicted Functional Partners:
tnnc1
Troponin C type 1b (slow).
   
 0.980
ENSACLP00000011933
Troponin I type 1a (skeletal, slow).
  
 0.969
ENSACLP00000034147
Troponin I type 1b (skeletal, slow).
  
 0.969
ENSACLP00000013800
Uncharacterized protein.
  
 0.947
LOC113025100
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
  
 0.926
ENSACLP00000003075
Troponin I4b, tandem duplicate 2.
  
 0.921
ENSACLP00000003528
Troponin I4b, tandem duplicate 2.
  
 0.919
LOC113025105
Troponin I2, fast skeletal type.
   
 0.909
LOC113025102
Troponin I2, fast skeletal type.
   
 0.909
LOC113025104
Uncharacterized protein.
   
 0.909
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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