Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002631Uncharacterized protein. (450 aa)    
Predicted Functional Partners:
LOC113033109
Homer scaffold protein 1b.
    
   0.974
LOC113010015
WH1 domain-containing protein.
    
   0.797
ENSACLP00000033147
Homer scaffold protein 3b.
    
   0.797
LOC113034139
Homeobox domain-containing protein.
      
 0.678
pak1ip1
PAK1 interacting protein 1.
      
 0.529
ENSACLP00000006900
Ints3 and nabp interacting protein.
      
 0.518
INIP
INTS3 and NABP interacting protein.
      
 0.518
pomk
Protein O-mannose kinase.
      
 0.494
mgat4a
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A.
      
 0.417
ENSACLP00000024312
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.
      
 0.417
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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