STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021283Zgc:63569; Belongs to the CTL (choline transporter-like) family. (731 aa)    
Predicted Functional Partners:
ENSACLP00000002014
Solute carrier family 22 member 2.
     
 0.744
LOC113006605
Solute carrier family 22 member 2.
     
 0.744
LOC113024200
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
  
 
0.728
LOC113031700
Solute carrier family 44 member 1b; Belongs to the CTL (choline transporter-like) family.
    
0.712
LOC113023642
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.582
SLC5A7
Solute carrier family 5 member 7; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.582
LOC113021300
Solute carrier family 5 member 7a; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.582
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
    0.542
LOC113011278
MFS domain-containing protein.
     
 0.527
ENSACLP00000019276
MFS domain-containing protein.
     
 0.527
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.