Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tacc1TACC_C domain-containing protein. (508 aa)    
Predicted Functional Partners:
ENSACLP00000026460
Cytoskeleton associated protein 5.
    
 0.935
ENSACLP00000038150
TACC_C domain-containing protein.
    
 
 0.905
LOC113030206
Malate synthase-like.
   
 
 0.863
nif3l1
NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae).
    
   0.803
LOC113036715
F-box and WD repeat domain containing 11b.
    
   0.802
ENSACLP00000031448
TACC_C domain-containing protein.
    
 
 0.764
ENSACLP00000015298
NBR1 autophagy cargo receptor b.
    
 0.747
LOC113028111
NBR1 autophagy cargo receptor a.
    
 0.747
lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 
 0.738
snrpg
Small nuclear ribonucleoprotein G.
    
   0.730
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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